I am heading the laboratory for Artificial Intelligence in Medical Imaging. I have previously completed post-doctoral training at the Medical Vision Group in the Computer Science and Artificial Intelligence Lab at MIT and the Lab for Computational Neuroimaging, Department of Neurology at Harvard medical school. I received my PhD and Diploma from the Computer Science Department at TU München.
Tel: 089 4400 56900
Email: christian at ai-med dot de
Networks: Research Gate | LinkedIn | ORCID
Publications: Google Scholar | DBLP | arXiv
Code: GitHub
Demo: QuickNAT
Old websites: MIT | TUM
Publications
Guha Roy, Abhijit; Conjeti, Sailesh; Karri, Sri Phani Krishna; Sheet, Debdoot; Katouzian, Amin; Wachinger, Christian; Navab, Nassir ReLayNet: Retinal Layer and Fluid Segmentation of Macular Optical Coherence Tomography using Fully Convolutional Network Journal Article In: Accepted at Biomedical Optics Express, 2017. @article{roy2017relaynet, |
Guha Roy, Abhijit; Conjeti, Sailesh; Sheet, Debdoot; Katouzian, Amin; Navab, Nassir; Wachinger, Christian Error Corrective Boosting for Learning Fully Convolutional Networks with Limited Data Journal Article In: Accepted at MICCAI 2017, 2017. @article{roy2017error, |
Wachinger, Christian; Rieckmann, Anna; Reuter, Martin Latent Processes Governing Neuroanatomical Change in Aging and Dementia Inproceedings In: International Conference on Medical Image Computing and Computer-Assisted Intervention, Springer 2017. @inproceedings{wachinger2017latent, |
Wachinger, Christian; Volkmer, Susanne; Bublath, Katharina; Bruder, Jennifer; Bartling, Jürgen; Schulte-Körne, Gerd Does the late positive component reflect successful reading acquisition? A longitudinal ERP study Journal Article In: NeuroImage: Clinical, 2017. @article{wachinger2017does, |
Wachinger, Christian; Reuter, Martin Domain adaptation for Alzheimer's disease diagnostics Journal Article In: NeuroImage, 2016. @article{wachinger2016domain, |
Wachinger, C; Brennan, M; Sharp, G; Golland, P Efficient Descriptor-Based Segmentation of Parotid Glands with Non-Local Means. Journal Article In: IEEE transactions on bio-medical engineering, 2016. @article{wachinger2016efficient, |
Wachinger, Christian; Salat, David H; Weiner, Michael; Reuter, Martin; Initiative, Alzheimer’s Disease Neuroimaging; others, Whole-brain analysis reveals increased neuroanatomical asymmetries in dementia for hippocampus and amygdala Journal Article In: Brain, vol. 139, no. 12, pp. 3253–3266, 2016. @article{wachinger2016whole, |
Reuter, Martin; Wachinger, Christian; Lombaert, Herv'e Spectral and Shape Analysis in Medical Imaging: First International Workshop, SeSAMI 2016, Held in Conjunction with MICCAI 2016, Athens, Greece, October 21, 2016, Revised Selected Papers Miscellaneous 2016. @misc{reuter2016spectral, |
Wachinger, Christian; Golland, Polina; Magnain, Caroline; Fischl, Bruce; Reuter, Martin Multi-modal robust inverse-consistent linear registration Journal Article In: Human brain mapping, vol. 36, no. 4, pp. 1365–1380, 2015. @article{wachinger2015multi, |
Wachinger, Christian; Golland, Polina; Kremen, William; Fischl, Bruce; Reuter, Martin; Initiative, Alzheimer's Disease Neuroimaging; others, BrainPrint: A discriminative characterization of brain morphology Journal Article In: NeuroImage, vol. 109, pp. 232–248, 2015. @article{wachinger2015brainprint, |
Wachinger, Christian; Golland, Polina Diverse Landmark Sampling from Determinantal Point Processes for Scalable Manifold Learning Journal Article In: arXiv preprint arXiv:1503.03506, 2015. @article{wachinger2015diverse, |
Toews, Matthew; Wachinger, Christian; Estepar, Raul San Jose; Wells III, William M A Feature-based Approach to Big Data Analysis of Medical Images Inproceedings In: International Conference on Information Processing in Medical Imaging, pp. 339–350, Springer International Publishing 2015. @inproceedings{toews2015feature, |
Wachinger, Christian; Golland, Polina Sampling from determinantal point processes for scalable manifold learning Journal Article In: Information Processing in Medical Imaging. Lecture Notes in Computer Science, Springer, pp. 687–698, 2015. @article{wachinger2015sampling, |
Wachinger, C; Toews, M; Langs, G; Wells, W; Golland, P Keypoint Transfer Segmentation Inproceedings In: Information Processing in Medical Imaging, Springer 2015. @inproceedings{wachinger2015keypoint, |
Wachinger, Christian; Fritscher, Karl; Sharp, Greg; Golland, Polina Countour-Driven Atlas-Based Segmenation Journal Article In: Transactions on medical imaging, 2015. @article{wachinger2015countour, |
Magnain, Caroline; Augustinack, Jean C; Reuter, Martin; Wachinger, Christian; Frosch, Matthew P; Ragan, Timothy; Akkin, Taner; Wedeen, Van J; Boas, David A; Fischl, Bruce Blockface histology with optical coherence tomography: A comparison with Nissl staining Journal Article In: NeuroImage, vol. 84, pp. 524–533, 2014. @article{magnain2014blockface, |
Wachinger, Christian; Golland, Polina Atlas-based under-segmentation Inproceedings In: International Conference on Medical Image Computing and Computer-Assisted Intervention, pp. 315–322, Springer International Publishing 2014. @inproceedings{wachinger2014atlas, |
Wachinger, Christian; Golland, Polina; Reuter, Martin BrainPrint: identifying subjects by their brain Inproceedings In: International Conference on Medical Image Computing and Computer-Assisted Intervention, pp. 41–48, Springer International Publishing 2014. @inproceedings{wachinger2014brainprint, |
Wachinger, C; Batmanghelich, K; Golland, P; Reuter, M BrainPrint in the Computer-Aided Diagnosis of Alzheimer’s Disease Inproceedings In: Proc MICCAI Workshop Challenge on Computer-Aided Diagnosis of Dementia Based on Structural MRI Data, pp. 129–138, 2014. @inproceedings{wachinger2014brainprintb, |
Wachinger, Christian; Brennan, Matthew; Sharp, Greg C; Golland, Polina On the importance of location and features for the patch-based segmentation of parotid glands Inproceedings In: MICCAI Workshop on Image-Guided Adaptive Radiation Therapy, 2014. @inproceedings{wachinger2014importance, |
Wachinger, C; Batmanghelich, K; Golland, P; Reuter, M BrainPrint in the computer-aided diagnosis of Alzheimer’s disease Inproceedings In: Proc MICCAI workshop challenge on computer-aided diagnosis of dementia based on structural MRI data, pp. 129–138, 2014. @inproceedings{wachinger2014brainprintb, |
Wachinger, Christian; Navab, Nassir Simultaneous registration of multiple images: similarity metrics and efficient optimization Journal Article In: Pattern Analysis and Machine Intelligence, IEEE Transactions on, vol. 35, no. 5, pp. 1221–1233, 2013. @article{wachinger2013simultaneous, |
Chen, George H; Wachinger, Christian; Golland, Polina Sparse projections of medical images onto manifolds Inproceedings In: International Conference on Information Processing in Medical Imaging, pp. 292–303, Springer Berlin Heidelberg 2013. @inproceedings{chen2013sparse, |
Wachinger, Christian; Sharp, Gregory C; Golland, Polina Contour-driven regression for label inference in atlas-based segmentation Inproceedings In: International Conference on Medical Image Computing and Computer-Assisted Intervention, pp. 211–218, Springer Berlin Heidelberg 2013. @inproceedings{wachinger2013contour, |
Wachinger, Christian; Golland, Polina; Fischl, Bruce; Reuter, Martin Robust registration of multi-modal images Journal Article In: Human Brain Mapping, 2013. @article{wachinger2013robust, |
Wachinger, Christian; Navab, Nassir Entropy and Laplacian images: Structural representations for multi-modal registration Journal Article In: Medical Image Analysis, vol. 16, no. 1, pp. 1–17, 2012. @article{wachinger2012entropy, |
Mateus, Diana; Wachinger, Christian; Atasoy, Selen; Schwarz, Loren; Navab, Nassir Learning manifolds: design analysis for medical applications Journal Article In: Machine Learning in Computer-Aided Diagnosis: Medical Imaging Intelligence and Analysis: Medical Imaging Intelligence and Analysis, pp. 374, 2012. @article{mateus2012learning, |
Wachinger, Christian; Klein, Tassilo; Navab, Nassir The 2D analytic signal for envelope detection and feature extraction on ultrasound images Journal Article In: Medical Image Analysis, vol. 16, no. 6, pp. 1073–1084, 2012. @article{wachinger20122d, |
Wachinger, Christian; Klein, Tassilo; Navab, Nassir Locally adaptive Nakagami-based ultrasound similarity measures Journal Article In: Ultrasonics, vol. 52, no. 4, pp. 547–554, 2012. @article{wachinger2012locally, |
Wachinger, Christian; Yigitsoy, Mehmet; Rijkhorst, Erik-Jan; Navab, Nassir Manifold learning for image-based breathing gating in ultrasound and MRI Journal Article In: Medical Image Analysis, vol. 16, no. 4, pp. 806–818, 2012. @article{wachinger2012manifold, |
Wachinger, Christian; Navab, Nassir A contextual maximum likelihood framework for modeling image registration Inproceedings In: Computer Vision and Pattern Recognition (CVPR), 2012 IEEE Conference on, pp. 1995–2002, IEEE 2012. @inproceedings{wachinger2012contextual, |
Wachinger, Christian; Golland, Polina Spectral label fusion Inproceedings In: International Conference on Medical Image Computing and Computer-Assisted Intervention, pp. 410–417, Springer Berlin Heidelberg 2012. @inproceedings{wachinger2012spectral, |
Moradi, Mehdi; Wachinger, Christian; Fedorov, Andriy; Wells, William M; Kapur, Tina; Wolfsberger, Luciant D; Nguyen, Paul; Tempany, Clare M MRI confirmed prostate tissue classification with Laplacian eigenmaps of ultrasound RF spectra Inproceedings In: International Workshop on Machine Learning in Medical Imaging, pp. 19–26, Springer Berlin Heidelberg 2012. @inproceedings{moradi2012mri, |
Yigitsoy, Mehmet; Wachinger, Christian; Navab, Nassir Temporal groupwise registration for motion modeling Inproceedings In: Biennial International Conference on Information Processing in Medical Imaging, pp. 648–659, Springer Berlin Heidelberg 2011. @inproceedings{yigitsoy2011temporal, |
Yigitsoy, Mehmet; Wachinger, Christian; Navab, Nassir Manifold learning for image-based breathing gating in MRI Inproceedings In: Proceedings of SPIE, pp. 796210, 2011. @inproceedings{yigitsoy2011manifold, |
Demirci, Stefanie; Bigdelou, Ali; Wang, Lejing; Wachinger, Christian; Baust, Maximilian; Tibrewal, Radhika; Ghotbi, Reza; Eckstein, Hans-Henning; Navab, Nassir 3D stent recovery from one x-ray projection Inproceedings In: International Conference on Medical Image Computing and Computer-Assisted Intervention, pp. 178–185, Springer Berlin Heidelberg 2011. @inproceedings{demirci20113d, |
Wachinger, Christian Ultrasound Mosaicing and Motion Modeling: Applications in Medical Image Registration PhD Thesis München, Technische Universität München, Diss., 2011, 2011. @phdthesis{wachinger2011ultrasound, |
Wachinger, Christian; Yigitsoy, Mehmet; Navab, Nassir Manifold learning for image-based breathing gating with application to 4D ultrasound Inproceedings In: International Conference on Medical Image Computing and Computer-Assisted Intervention, pp. 26–33, Springer Berlin Heidelberg 2010. @inproceedings{wachinger2010manifold, |
Wachinger, Christian; Mateus, Diana; Keil, Andreas; Navab, Nassir Manifold learning for patient position detection in MRI Inproceedings In: 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, pp. 1353–1356, IEEE 2010. @inproceedings{wachinger2010manifoldb, |
Wachinger, Christian; Navab, Nassir Structural image representation for image registration Inproceedings In: Proceedings of IEEE Computer Vision and Pettern Recognition Workshops, pp. 23–30, 2010. @inproceedings{wachinger2010structural, |
Wachinger, Christian; Navab, Nassir Manifold Learning for Multi-Modal Image Registration Inproceedings In: Proceedings of the British Machine Vision Conference, pages, pp. 82–1, 2010. @inproceedings{wachinger2010manifoldb, |
Glocker, Benjamin; Navab, Nassir; Wachinger, Christian; Zeltner, Jochen Verfahren zum Kombinieren von Bildern und Magnetresonanzgerät Miscellaneous 2010, (DE Patent 102,008,045,278). @misc{glocker2010verfahren, |
Wachinger, Christian; Navab, Nassir Similarity metrics and efficient optimization for simultaneous registration Inproceedings In: Computer Vision and Pattern Recognition, 2009. CVPR 2009. IEEE Conference on, pp. 667–674, IEEE 2009. @inproceedings{wachinger2009similarity, |
Wachinger, Christian; Navab, Nassir Alignment of viewing-angle dependent ultrasound images Inproceedings In: International Conference on Medical Image Computing and Computer-Assisted Intervention, pp. 779–786, Springer Berlin Heidelberg 2009. @inproceedings{wachinger2009alignment, |
Glocker, B; Wachinger, C; Zeltner, J; Paragios, N; Komodakis, N; Hansen, M; Navab, N MRI Composing for Whole Body Imaging Journal Article In: Bildverarbeitung für die Medizin 2009, pp. 420–424, 2009. @article{glocker2009mri, |
Wachinger, Christian; Shams, Ramtin; Navab, Nassir Towards an Estimation of Acoustic Impedance from Multiple Ultrasound Images Journal Article In: Bildverarbeitung für die Medizin 2009, pp. 405–409, 2009. @article{wachinger2009towards, |
Wachinger, Christian; Baumann, Simon; Zeltner, Jochen; Glocker, Ben; Navab, Nassir Sphere extraction in MR images with application to whole-body MRI Inproceedings In: SPIE Medical Imaging, pp. 72594J–72594J, International Society for Optics and Photonics 2009. @inproceedings{wachinger2009sphere, |
Wachinger, Christian; Wein, Wolfgang; Navab, Nassir Registration Strategies and Similarity Measures for Three-dimensional Ultrasound Mosaicing1 Journal Article In: Academic radiology, vol. 15, no. 11, pp. 1404–1415, 2008. @article{wachinger2008registration, |
Wachinger, Christian; Glocker, Ben; Zeltner, Jochen; Paragios, Nikos; Komodakis, Nikos; Hansen, Michael Sass; Navab, Nassir Deformable mosaicing for whole-body MRI Inproceedings In: International Conference on Medical Image Computing and Computer-Assisted Intervention, pp. 113–121, Springer Berlin Heidelberg 2008. @inproceedings{wachinger2008deformable, |
Wachinger, Christian; Shams, Ramtin; Navab, Nassir Estimation of acoustic impedance from multiple ultrasound images with application to spatial compounding Inproceedings In: Computer Vision and Pattern Recognition Workshops, 2008. CVPRW'08. IEEE Computer Society Conference on, pp. 1–8, IEEE 2008. @inproceedings{wachinger2008estimation, |
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