Fabian Bongratz

About me:

I am a PhD student interested in medical image segmentation, 3D reconstruction, and shape analysis. My ultimate goal is to bring intelligent and robust algorithms into clinical practice. Before joining AI-Med, I completed the Master’s program Robotics, Cognition, Intelligence at TUM.

E-mail: fabi.bongratz@tum.de

Profiles: LinkedIn; GitHub



Research interests:

  • Medical Image Analysis
  • Image Segmentation
  • Geometric Deep Learning
  • 3D Reconstruction
  • Shape Analysis


Bongratz, Fabian; Rickmann, Anne-Marie; Wachinger, Christian

Abdominal organ segmentation via deep diffeomorphic mesh deformations Journal Article

In: Scientific Reports, vol. 13, no. 1, 2023.

Abstract | Links | BibTeX

Rickmann, Anne-Marie; Bongratz, Fabian; P"olsterl, Sebastian; Sarasua, Ignacio; Wachinger, Christian

Joint Reconstruction and Parcellation of Cortical Surfaces Inproceedings

In: International Workshop on Machine Learning in Clinical Neuroimaging, pp. 3–12, Springer, 2022.

Links | BibTeX

Bongratz, Fabian; Rickmann, Anne-Marie; Pölsterl, Sebastian; Wachinger, Christian

Vox2Cortex: Fast Explicit Reconstruction of Cortical Surfaces from 3D MRI Scans with Geometric Deep Neural Networks Inproceedings

In: Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR), 2022.

Abstract | Links | BibTeX