2018
Fast MRI Whole Brain Segmentation with Fully Convolutional Neural Networks Incollection
In: Bildverarbeitung für die Medizin 2018, pp. 42–42, Springer, 2018.
2017
A Multi-Armed Bandit to Smartly Select a Training Set from Big Medical Data Conference
Proceedings of MICCAI 2017, Elsevier, 2017.
Guiding Multimodal Registration with Learned Optimization Updates Journal Article
In: Medical Image Analysis, 2017.
3D intra-operative ultrasound and MR image guidance: pursuing an ultrasound-based management of brainshift to enhance neuronavigation Journal Article
In: International Journal of Computer Assisted Radiology and Surgery, pp. 1–15, 2017.
Abtract: Shape Analysis in Human Brain MRI Incollection
In: Bildverarbeitung für die Medizin 2017, pp. 358–358, Springer Vieweg, Berlin, Heidelberg, 2017.
DeepNAT: Deep Convolutional Neural Network for Segmenting Neuroanatomy Journal Article
In: NeuroImage, 2017.
Deep Residual Hashing Journal Article
In: Accepted at MICCAI 2017, 2017.
ReLayNet: Retinal Layer and Fluid Segmentation of Macular Optical Coherence Tomography using Fully Convolutional Network Journal Article
In: Accepted at Biomedical Optics Express, 2017.
Error Corrective Boosting for Learning Fully Convolutional Networks with Limited Data Journal Article
In: Accepted at MICCAI 2017, 2017.
Latent Processes Governing Neuroanatomical Change in Aging and Dementia Inproceedings
In: International Conference on Medical Image Computing and Computer-Assisted Intervention, Springer 2017.
Does the late positive component reflect successful reading acquisition? A longitudinal ERP study Journal Article
In: NeuroImage: Clinical, 2017.
2016
Hands-Free Segmentation of Medical Volumes via Binary Inputs Proceeding
Springer International Publishing 2016.
Learning Optimization Updates for Multimodal Registration Proceeding
Springer 2016.
A Deep Metric for Multimodal Registration Proceeding
Springer 2016.
Domain adaptation for Alzheimer's disease diagnostics Journal Article
In: NeuroImage, 2016.
Efficient Descriptor-Based Segmentation of Parotid Glands with Non-Local Means. Journal Article
In: IEEE transactions on bio-medical engineering, 2016.
Whole-brain analysis reveals increased neuroanatomical asymmetries in dementia for hippocampus and amygdala Journal Article
In: Brain, vol. 139, no. 12, pp. 3253–3266, 2016.
Spectral and Shape Analysis in Medical Imaging: First International Workshop, SeSAMI 2016, Held in Conjunction with MICCAI 2016, Athens, Greece, October 21, 2016, Revised Selected Papers Miscellaneous
2016.
Supervised domain adaptation of decision forests: Transfer of models trained in vitro for in vivo intravascular ultrasound tissue characterization Journal Article
In: Medical image analysis, vol. 32, pp. 1–17, 2016.
Domain Adapted Model for In Vivo Intravascular Ultrasound Tissue Characterization Journal Article
In: Computing and Visualization for Intravascular Imaging and Computer-Assisted Stenting, pp. 157, 2016.
2015
Multi-modal robust inverse-consistent linear registration Journal Article
In: Human brain mapping, vol. 36, no. 4, pp. 1365–1380, 2015.
BrainPrint: A discriminative characterization of brain morphology Journal Article
In: NeuroImage, vol. 109, pp. 232–248, 2015.
Standardized evaluation of algorithms for computer-aided diagnosis of dementia based on structural MRI: The CADDementia challenge Journal Article
In: NeuroImage, vol. 111, pp. 562–579, 2015.
Diverse Landmark Sampling from Determinantal Point Processes for Scalable Manifold Learning Journal Article
In: arXiv preprint arXiv:1503.03506, 2015.
A Feature-based Approach to Big Data Analysis of Medical Images Inproceedings
In: International Conference on Information Processing in Medical Imaging, pp. 339–350, Springer International Publishing 2015.
Sampling from determinantal point processes for scalable manifold learning Journal Article
In: Information Processing in Medical Imaging. Lecture Notes in Computer Science, Springer, pp. 687–698, 2015.
Keypoint Transfer Segmentation Inproceedings
In: Information Processing in Medical Imaging, Springer 2015.
Countour-Driven Atlas-Based Segmenation Journal Article
In: Transactions on medical imaging, 2015.
2014
A sparse approach to build shape models with routine clinical data Proceeding
IEEE 2014.
Blockface histology with optical coherence tomography: A comparison with Nissl staining Journal Article
In: NeuroImage, vol. 84, pp. 524–533, 2014.
Atlas-based under-segmentation Inproceedings
In: International Conference on Medical Image Computing and Computer-Assisted Intervention, pp. 315–322, Springer International Publishing 2014.
BrainPrint: identifying subjects by their brain Inproceedings
In: International Conference on Medical Image Computing and Computer-Assisted Intervention, pp. 41–48, Springer International Publishing 2014.
BrainPrint in the Computer-Aided Diagnosis of Alzheimer’s Disease Inproceedings
In: Proc MICCAI Workshop Challenge on Computer-Aided Diagnosis of Dementia Based on Structural MRI Data, pp. 129–138, 2014.
On the importance of location and features for the patch-based segmentation of parotid glands Inproceedings
In: MICCAI Workshop on Image-Guided Adaptive Radiation Therapy, 2014.
BrainPrint in the computer-aided diagnosis of Alzheimer’s disease Inproceedings
In: Proc MICCAI workshop challenge on computer-aided diagnosis of dementia based on structural MRI data, pp. 129–138, 2014.
2013
Automatic segmentation of the fetal cerebellum on ultrasound volumes, using a 3D statistical shape model Journal Article
In: vol. 51, no. 9, pp. 1021–1030, 2013.
Simultaneous registration of multiple images: similarity metrics and efficient optimization Journal Article
In: Pattern Analysis and Machine Intelligence, IEEE Transactions on, vol. 35, no. 5, pp. 1221–1233, 2013.
Sparse projections of medical images onto manifolds Inproceedings
In: International Conference on Information Processing in Medical Imaging, pp. 292–303, Springer Berlin Heidelberg 2013.
Contour-driven regression for label inference in atlas-based segmentation Inproceedings
In: International Conference on Medical Image Computing and Computer-Assisted Intervention, pp. 211–218, Springer Berlin Heidelberg 2013.
Robust registration of multi-modal images Journal Article
In: Human Brain Mapping, 2013.
2012
Entropy and Laplacian images: Structural representations for multi-modal registration Journal Article
In: Medical Image Analysis, vol. 16, no. 1, pp. 1–17, 2012.
Learning manifolds: design analysis for medical applications Journal Article
In: Machine Learning in Computer-Aided Diagnosis: Medical Imaging Intelligence and Analysis: Medical Imaging Intelligence and Analysis, pp. 374, 2012.
The 2D analytic signal for envelope detection and feature extraction on ultrasound images Journal Article
In: Medical Image Analysis, vol. 16, no. 6, pp. 1073–1084, 2012.
Locally adaptive Nakagami-based ultrasound similarity measures Journal Article
In: Ultrasonics, vol. 52, no. 4, pp. 547–554, 2012.
Manifold learning for image-based breathing gating in ultrasound and MRI Journal Article
In: Medical Image Analysis, vol. 16, no. 4, pp. 806–818, 2012.
A contextual maximum likelihood framework for modeling image registration Inproceedings
In: Computer Vision and Pattern Recognition (CVPR), 2012 IEEE Conference on, pp. 1995–2002, IEEE 2012.
Spectral label fusion Inproceedings
In: International Conference on Medical Image Computing and Computer-Assisted Intervention, pp. 410–417, Springer Berlin Heidelberg 2012.
MRI confirmed prostate tissue classification with Laplacian eigenmaps of ultrasound RF spectra Inproceedings
In: International Workshop on Machine Learning in Medical Imaging, pp. 19–26, Springer Berlin Heidelberg 2012.
2011
The 2D analytic signal on RF and B-mode ultrasound images Inproceedings
In: Biennial International Conference on Information Processing in Medical Imaging, pp. 359–370, Springer Berlin Heidelberg 2011.
Temporal groupwise registration for motion modeling Inproceedings
In: Biennial International Conference on Information Processing in Medical Imaging, pp. 648–659, Springer Berlin Heidelberg 2011.